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EBOOK
Author Buffalo, Vince,
Title Bioinformatics data skills : reproducible and robust research with open source tools / Vince Buffalo.
Imprint Sebastopol, CA : O'Reilly, 2015.
Edition First edition.

LOCATION CALL # STATUS MESSAGE
 OHIOLINK SAFARI EBOOKS    ONLINE  
View online
Author Buffalo, Vince,
Subject Bioinformatics.
Open source software.
Add Title Reproducible and robust research with open source tools
LOCATION CALL # STATUS MESSAGE
 OHIOLINK SAFARI EBOOKS    ONLINE  
View online
Author Buffalo, Vince,
Subject Bioinformatics.
Open source software.
Add Title Reproducible and robust research with open source tools
Description 1 online resource (1 volume)
Edition First edition.
Note Online resource; title from cover (Safari, viewed July 16, 2015).
Bibliography Note Includes bibliographical references and index.
Contents Preface. Part 1 Ideology, data skills for robust and reproducible bioinformatics: How to learn bioinformatics. Part 2 Prerequisites, essential skills for getting started with a bioinformatics project: Setting up and managing a bioinformatics project -- Remedial unix shell -- Working with remote machines -- Git for scientists -- Bioinformatics data. Part 3 Practice, bioinformatics data skills: Unix data tools -- A rapid introduction to the R language -- Working with range data -- Working with sequence data -- Working with alignment data -- Bioinformatics shell scripting, writing pipelines, and parallelizing tasks -- Out-of-memory approaches, Tabix and SQLite -- Conclusion. Glossary. Bibliography. Index.
Summary Learn the data skills necessary for turning large sequencing datasets into reproducible and robust biological findings. With this practical guide, you'll learn how to use freely available open source tools to extract meaning from large complex biological datasets.
ISBN 1449367372
9781449367374
9781449367374
OCLC # 914287777


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